Excuse me if im wrong, but doesent win 2003 follow same setup as standard windows server?
http://www.eqemulator.net/wiki/wikka...=ws70845mysql5
id think your missing a few files if thats all thats in the server folder...
heres a shot of my folder(new install)
http://img54.imageshack.us/img54/2699/windowma0.jpg