There is a way to modify the timeout for the zone when launching.
Bring up your SQL browser and check out the two rules tables. You will see the entries to modify.
As an aside, I was having a very similar problem on one of 3 machines on my network. Turns out, the kids had moved some memory from what it was originally. Once I returned the offending machine to 512 rather than 256, it was no longer chunking down the memory while trying to load in sections. Any such config problems for your machine?
I would hate to see you go through all the massaging (read I had to by my database dinner first) to get the client to respond properly.
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