I think it depends. If you change anything in the Rules table, the server will have to be reset for the changes to take place..
As far as changes to the individual zones, I'm not 100% sure. I just got a server up and running myself this past week. I think a zone restart would suffice, because its not a server-wide change.
*Edit* I read somewhere, I think the release notes, that the variables table is being used less and less
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