To get the fix on your server you could do one of 2 things. First if you didn't code any special stuff for your server then you could just download the newest server source and run that. (this will not affect your database in any way or any custom spawns/levels and what not).
Pretty sure they have a SVN system up so you can actually just update the specific fix to your server without having to download the entire new source.
Other way is to just go in change the code in file above and recompile the source for your new server source executable.
Again it all depends on what you are comfortable with.
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